Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | AT705_RS01575 | O13871 | Negative | 361035 - 361838 | 29481.0 |
| pyridoxal-dependent decarboxylase | AT705_RS01580 | P71362 | Positive | 362276 - 363766 | 53264.2 |
| l-rhamnose mutarotase | AT705_RS01585 | Not Available | Positive | 364058 - 364447 | 15368.1 |
| l-rhamnose mutarotase | AT705_RS01590 | Not Available | Positive | 364444 - 364803 | 14363.2 |
| lysine n(6)-hydroxylase/l-ornithine n(5)-oxygenase family protein | AT705_RS01595 | Not Available | Positive | 365059 - 366399 | 50231.7 |
| fad-binding oxidoreductase | AT705_RS01600 | P40859 | Positive | 366386 - 367444 | 38739.8 |
| dihydrodipicolinate synthase family protein | AT705_RS01605 | A7Z4U8 | Positive | 367459 - 368382 | 34645.6 |
| hypothetical protein | AT705_RS01610 | A5D523 | Positive | 368370 - 369395 | 37911.8 |
| had family hydrolase | AT705_RS01615 | Not Available | Positive | 369423 - 370094 | 24842.7 |
| abc transporter substrate-binding protein | AT705_RS01620 | Not Available | Positive | 370106 - 370969 | 32024.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
