Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing hybrid sensor histidine kinase/response regulator | AT705_RS01480 | Not Available | Negative | 335450 - 339172 | 137279.0 |
| hybrid sensor histidine kinase/response regulator | AT705_RS01485 | P23620 | Positive | 339461 - 340573 | 39892.3 |
| isopenicillin n synthase family oxygenase | AT705_RS01490 | A0A2U8U2L3 | Positive | 340753 - 341595 | 31695.5 |
| n-acetylglucosamine kinase | AT705_RS01495 | Q9KUA9 | Positive | 342088 - 342999 | 32311.8 |
| n-acetylglucosamine-6-phosphate deacetylase | AT705_RS01500 | A0KYQ5 | Positive | 343003 - 344121 | 39994.5 |
| transmembrane glucosamine n-acetyltransferase nagx | AT705_RS01505 | Q3UDW8 | Positive | 344187 - 345308 | 41135.1 |
| glucosamine-6-phosphate deaminase | AT705_RS01510 | B1KFS0 | Positive | 345583 - 346377 | 28683.1 |
| nad(+) diphosphatase | AT705_RS01515 | Q5RD76 | Positive | 346493 - 347437 | 35967.3 |
| cystathionine beta-lyase | AT705_RS01520 | P06721 | Positive | 347465 - 348634 | 42850.5 |
| exodeoxyribonuclease i | AT705_RS01525 | P45188 | Negative | 348678 - 350129 | 55104.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
