Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | AT705_RS01430 | P0A957 | Positive | 322366 - 322986 | 21319.9 |
| type i glyceraldehyde-3-phosphate dehydrogenase | AT705_RS01435 | P50321 | Positive | 323004 - 324008 | 35979.8 |
| yfcc family protein | AT705_RS01440 | P55908 | Positive | 324212 - 325639 | 50962.7 |
| s8 family serine peptidase | AT705_RS01445 | Not Available | Positive | 325929 - 327803 | 68339.7 |
| tonb-dependent receptor | AT705_RS01450 | P46359 | Negative | 328382 - 330598 | 81171.3 |
| eama family transporter | AT705_RS01455 | Q56072 | Positive | 331079 - 331978 | 32338.8 |
| adenylate kinase | AT705_RS01460 | Q3IKQ1 | Positive | 332177 - 332821 | 23324.8 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | AT705_RS01465 | Q3IIQ3 | Negative | 332896 - 333864 | 36940.2 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | AT705_RS01470 | Q3IIQ4 | Negative | 333875 - 334600 | 27196.7 |
| duf3334 family protein | AT705_RS01475 | Not Available | Positive | 334726 - 335412 | 25299.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
