Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin-dependent carboxyltransferase family protein | AT705_RS01380 | P75745 | Negative | 310567 - 311502 | 33524.1 |
| 5-oxoprolinase subunit pxpb | AT705_RS01385 | P0AAV5 | Negative | 311496 - 312152 | 24016.6 |
| leucyl aminopeptidase | AT705_RS01390 | Q8EI85 | Negative | 312353 - 313867 | 53987.3 |
| peptide-methionine (s)-s-oxide reductase msra | AT705_RS01395 | P0DC40 | Positive | 314143 - 315363 | 45316.9 |
| hypothetical protein | AT705_RS01400 | Not Available | Negative | 315387 - 315578 | 6989.43 |
| abc transporter substrate-binding protein | AT705_RS01405 | Not Available | Positive | 315820 - 316710 | 34025.9 |
| laci family dna-binding transcriptional regulator | AT705_RS01410 | A7MFD3 | Negative | 316773 - 317795 | 37389.1 |
| glucokinase | AT705_RS01415 | Q21LZ9 | Positive | 318184 - 319200 | 36132.0 |
| laci family dna-binding transcriptional regulator | AT705_RS01420 | Q9JMQ1 | Positive | 319215 - 320228 | 37546.7 |
| phosphogluconate dehydratase | AT705_RS01425 | P31961 | Positive | 320489 - 322342 | 66088.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
