Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpa | AT705_RS01330 | P0ABI1 | Positive | 299516 - 301783 | 83900.3 |
| translation initiation factor if-1 | AT705_RS01335 | Q3IH34 | Negative | 301886 - 302104 | 8221.17 |
| arginyltransferase | AT705_RS01340 | A4SNL5 | Negative | 302197 - 302901 | 27673.1 |
| leucyl/phenylalanyl-trna--protein transferase | AT705_RS01345 | Q3IH36 | Negative | 302894 - 303610 | 27350.0 |
| thioredoxin-disulfide reductase | AT705_RS01350 | Q9KSS4 | Negative | 303734 - 304687 | 34013.2 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | AT705_RS01355 | P44704 | Positive | 304945 - 306270 | 50333.8 |
| asparagine synthase b | AT705_RS01360 | P22106 | Negative | 306310 - 307986 | 62937.3 |
| pyroglutamyl-peptidase i | AT705_RS01365 | A1JR34 | Negative | 308156 - 308818 | 23568.2 |
| duf979 domain-containing protein | AT705_RS01370 | Not Available | Negative | 308811 - 309830 | 36184.3 |
| duf969 domain-containing protein | AT705_RS01375 | Not Available | Negative | 309827 - 310570 | 26703.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
