Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4826 family protein | AT705_RS01280 | Not Available | Positive | 289764 - 290198 | 16058.1 |
| gnat family n-acetyltransferase | AT705_RS01285 | Not Available | Negative | 290182 - 290640 | 17650.4 |
| cupin domain-containing protein | AT705_RS01290 | P27431 | Negative | 290761 - 291915 | 43076.9 |
| adenylosuccinate lyase | AT705_RS01295 | P0AB90 | Negative | 292154 - 293524 | 51225.1 |
| high frequency lysogenization protein hfld | AT705_RS01300 | Q3IH15 | Negative | 293558 - 294160 | 22244.2 |
| trna 2-thiouridine(34) synthase mnma | AT705_RS01305 | Q3IH16 | Negative | 294160 - 295260 | 41106.6 |
| pseudouridine synthase | AT705_RS01310 | P44827 | Negative | 295368 - 296012 | 24634.8 |
| nadp-dependent isocitrate dehydrogenase | AT705_RS01315 | P41561 | Negative | 296114 - 298336 | 80630.5 |
| cold shock domain-containing protein cspd | AT705_RS01320 | P0A970 | Negative | 298745 - 298963 | 7851.28 |
| atp-dependent clp protease adapter clps | AT705_RS01325 | Q5R0C3 | Positive | 299170 - 299487 | 12109.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
