Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AT705_RS01080 | Not Available | Positive | 238757 - 242599 | 142592.0 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | AT705_RS01085 | Q3IHA0 | Negative | 242967 - 244406 | 53045.8 |
| arsj-associated glyceraldehyde-3-phosphate dehydrogenase | AT705_RS01090 | Not Available | Positive | 244635 - 245648 | 36970.2 |
| organoarsenical effux mfs transporter arsj | AT705_RS01095 | Not Available | Positive | 245653 - 246852 | 44160.3 |
| methyl-accepting chemotaxis protein | AT705_RS01100 | Not Available | Negative | 246925 - 248904 | 71751.7 |
| trna 2-thiocytidine(32) synthetase ttca | AT705_RS01105 | Q3IHG8 | Negative | 249309 - 250226 | 34337.3 |
| universal stress protein uspe | AT705_RS01110 | Q8ZE81 | Negative | 250377 - 251300 | 34482.1 |
| fnr family transcription factor | AT705_RS01115 | A5F890 | Negative | 251401 - 252129 | 27338.0 |
| sulfite exporter taue/safe family protein | AT705_RS01120 | Not Available | Negative | 252357 - 253028 | 24000.0 |
| cbb3-type cytochrome oxidase assembly protein ccos | AT705_RS01125 | Not Available | Negative | 253006 - 253188 | 6937.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
