Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease subunit | AT705_RS01035 | Not Available | Negative | 224170 - 224979 | 29842.5 |
| m2 family metallopeptidase | AT705_RS01040 | P12820 | Negative | 225097 - 226908 | 68510.8 |
| acyl-coa dehydrogenase | AT705_RS01045 | Q8ZRJ7 | Positive | 227057 - 229321 | 82985.8 |
| hypothetical protein | AT705_RS01050 | Not Available | Negative | 229439 - 229876 | 16542.9 |
| pkd domain-containing protein | AT705_RS01055 | Not Available | Negative | 230039 - 232384 | 85541.8 |
| efflux rnd transporter permease subunit | AT705_RS01060 | Not Available | Negative | 232583 - 235726 | 116002.0 |
| efflux rnd transporter periplasmic adaptor subunit | AT705_RS01065 | Not Available | Negative | 235730 - 236905 | 42617.4 |
| ykgj family cysteine cluster protein | AT705_RS24750 | Q9KT48 | Positive | 237127 - 237375 | 8816.62 |
| type i methionyl aminopeptidase | AT705_RS01070 | P0A1X7 | Negative | 237511 - 238326 | 29476.6 |
| pard-like family protein | AT705_RS01075 | Not Available | Negative | 238292 - 238504 | 8088.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
