Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnase rnm | AT705_RS00985 | P77766 | Positive | 214344 - 215189 | 31164.9 |
| l-threonylcarbamoyladenylate synthase | AT705_RS00990 | P0AFR5 | Positive | 215194 - 215814 | 23406.3 |
| scpa family protein | AT705_RS00995 | Q9PAP4 | Positive | 215817 - 216632 | 31016.8 |
| smc-scp complex subunit scpb | AT705_RS01000 | Q83CP9 | Positive | 216683 - 217270 | 22203.7 |
| 23s rrna pseudouridine(2605) synthase rlub | AT705_RS01005 | Q8X4Q8 | Positive | 217267 - 218127 | 33388.5 |
| ycik family oxidoreductase | AT705_RS01010 | P31808 | Negative | 218169 - 218912 | 26689.2 |
| vola/pla-1 family phospholipase | AT705_RS01015 | Q9KL83 | Positive | 219182 - 221602 | 83745.1 |
| protease sohb | AT705_RS01020 | P0AG14 | Positive | 221675 - 222688 | 37461.2 |
| histidine phosphatase family protein | AT705_RS01025 | Not Available | Negative | 222719 - 223219 | 18883.8 |
| abc transporter atp-binding protein | AT705_RS01030 | Q8KLG1 | Negative | 223256 - 224173 | 33640.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
