Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycii family protein | AT705_RS00935 | P0AB56 | Negative | 204018 - 204317 | 10721.8 |
| sodium-dependent transporter | AT705_RS00940 | Not Available | Positive | 204577 - 206001 | 51518.1 |
| cpbp family intramembrane glutamic endopeptidase | AT705_RS00945 | Not Available | Negative | 206051 - 206692 | 24684.5 |
| hu family dna-binding protein | AT705_RS00950 | Q87E48 | Positive | 207018 - 207296 | 9994.19 |
| tryptophan synthase subunit alpha | AT705_RS00955 | A7MMG7 | Negative | 207305 - 208111 | 28851.4 |
| tryptophan synthase subunit beta | AT705_RS00960 | B4S1J4 | Negative | 208108 - 209289 | 42610.0 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | AT705_RS00965 | P22098 | Negative | 209300 - 210664 | 50149.0 |
| anthranilate phosphoribosyltransferase | AT705_RS00970 | Q3IKY4 | Negative | 210657 - 211661 | 35415.5 |
| aminodeoxychorismate/anthranilate synthase component ii | AT705_RS00975 | O25868 | Negative | 211664 - 212254 | 21517.0 |
| anthranilate synthase component 1 | AT705_RS00980 | Q9KST2 | Negative | 212251 - 213825 | 57590.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
