Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AT705_RS00835 | Not Available | Positive | 183147 - 183674 | 19986.8 |
| class ii glutamine amidotransferase | AT705_RS00840 | Q47147 | Positive | 183923 - 184687 | 28719.5 |
| duf3108 domain-containing protein | AT705_RS00845 | Not Available | Negative | 184764 - 185534 | 29632.2 |
| phosphoribosylglycinamide formyltransferase | AT705_RS00850 | P08179 | Negative | 185476 - 186138 | 24585.3 |
| phosphoribosylformylglycinamidine cyclo-ligase | AT705_RS00855 | Q3IIQ2 | Negative | 186138 - 187190 | 37292.6 |
| bifunctional diguanylate cyclase/phosphodiesterase | AT705_RS00860 | O34311 | Positive | 187318 - 189018 | 63668.7 |
| phospholipid-binding protein mlac | AT705_RS00865 | P0ADV7 | Positive | 189224 - 189811 | 21529.2 |
| duf2989 domain-containing protein | AT705_RS00870 | Not Available | Negative | 189851 - 190657 | 30883.6 |
| glyceraldehyde-3-phosphate dehydrogenase | AT705_RS00875 | Q02PG5 | Positive | 190991 - 192436 | 53103.1 |
| m14-type cytosolic carboxypeptidase | AT705_RS00880 | P30795 | Positive | 192649 - 193776 | 42872.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
