Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | AT705_RS00780 | B9JI94 | Negative | 170256 - 171521 | 46828.7 |
| dihydrodipicolinate synthase family protein | AT705_RS00785 | Q57695 | Positive | 171725 - 172639 | 34122.7 |
| 4-hydroxyproline epimerase | AT705_RS00790 | A3QFI1 | Positive | 172644 - 173645 | 36087.9 |
| aldehyde dehydrogenase (nadp(+)) | AT705_RS00795 | Q08IB7 | Positive | 173701 - 175194 | 53656.0 |
| gntr family transcriptional regulator | AT705_RS00800 | P37338 | Positive | 175381 - 176049 | 24731.8 |
| sulfotransferase family protein | AT705_RS00805 | O67178 | Negative | 176210 - 177778 | 58872.8 |
| tonb-dependent receptor | AT705_RS00810 | Not Available | Negative | 177850 - 180261 | 87927.5 |
| hypothetical protein | AT705_RS00820 | Not Available | Negative | 180839 - 181177 | 12088.4 |
| hypothetical protein | AT705_RS00825 | Not Available | Positive | 181456 - 181995 | 20470.1 |
| hypothetical protein | AT705_RS00830 | Not Available | Positive | 182602 - 183093 | 19236.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
