Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1799 domain-containing protein | AT705_RS02740 | Not Available | Positive | 614112 - 614456 | 12245.5 |
| Putative tail length tape measure protein | AT705_RS02745 | P85501 | Positive | 614416 - 617817 | 121390.0 |
| hypothetical protein | AT705_RS02750 | Not Available | Negative | 617814 - 618209 | 14840.8 |
| duf2971 domain-containing protein | AT705_RS02755 | Not Available | Positive | 618368 - 619246 | 33721.1 |
| hypothetical protein | AT705_RS02760 | Not Available | Positive | 619404 - 620417 | 39026.6 |
| Tail protein | AT705_RS02765 | Not Available | Positive | 620493 - 621098 | 22256.4 |
| Hypothetical protein | AT705_RS02770 | Not Available | Positive | 621100 - 621690 | 21823.8 |
| Hypothetical protein | AT705_RS02775 | Not Available | Positive | 621674 - 622081 | 15123.2 |
| Tail fiber protein | AT705_RS02780 | Not Available | Positive | 622074 - 623351 | 47796.6 |
| Tail protein | AT705_RS02785 | Not Available | Positive | 623393 - 629419 | 215538.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
