Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | AT705_RS00625 | P25888 | Positive | 130062 - 131285 | 45340.7 |
| gnat family n-acetyltransferase | AT705_RS00630 | Not Available | Positive | 131327 - 131782 | 17484.3 |
| dmt family transporter | AT705_RS00635 | O68826 | Negative | 131779 - 132630 | 31502.5 |
| ysc84-related protein | AT705_RS00645 | Not Available | Positive | 133362 - 133925 | 20013.0 |
| nad(p)-dependent oxidoreductase | AT705_RS00650 | Not Available | Positive | 134069 - 134791 | 26114.5 |
| porin | AT705_RS00655 | Not Available | Negative | 134788 - 135987 | 44169.8 |
| methyl-accepting chemotaxis protein | AT705_RS00660 | Not Available | Positive | 136078 - 137961 | 68061.9 |
| yaii/yqxd family protein | AT705_RS00665 | B8GM72 | Positive | 138019 - 138480 | 17039.5 |
| gnat family n-acetyltransferase | AT705_RS00670 | Not Available | Positive | 138884 - 139366 | 18306.0 |
| hypothetical protein | AT705_RS00675 | Not Available | Positive | 139544 - 139828 | 10617.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
