Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AT705_RS00530 | Q9WYI7 | Negative | 108663 - 109358 | 25751.0 |
| efflux rnd transporter periplasmic adaptor subunit | AT705_RS00535 | Not Available | Negative | 109377 - 110645 | 46656.8 |
| abc transporter atp-binding protein | AT705_RS00540 | P9WQK0 | Positive | 110924 - 111580 | 23928.0 |
| ftsx-like permease family protein | AT705_RS00545 | Not Available | Positive | 111573 - 113987 | 88147.2 |
| lipocalin-like domain-containing protein | AT705_RS00550 | Not Available | Positive | 113998 - 115074 | 39880.4 |
| acetoacetate decarboxylase family protein | AT705_RS00555 | Not Available | Negative | 115245 - 116177 | 33683.1 |
| hypothetical protein | AT705_RS00560 | Not Available | Positive | 116477 - 116848 | 14201.9 |
| hypothetical protein | AT705_RS00565 | Not Available | Positive | 116872 - 117177 | 10717.4 |
| ferrous iron transport protein b | AT705_RS00570 | Q8XED4 | Negative | 117214 - 119298 | 75495.6 |
| feoa family protein | AT705_RS00575 | Not Available | Negative | 119318 - 119542 | 7852.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
