Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 101476 - 101562 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 101652 - 101727 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 101760 - 101846 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 102039 - 102114 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 102148 - 102221 | Not Available |
| hypothetical protein | AT705_RS00505 | Not Available | Negative | 102245 - 103333 | 40081.6 |
| pas domain-containing sensor histidine kinase | AT705_RS00510 | Q1RJB3 | Negative | 103352 - 104686 | 49275.9 |
| sigma-54 dependent transcriptional regulator | AT705_RS00515 | P23747 | Negative | 104683 - 106014 | 48885.6 |
| abc transporter permease | AT705_RS00520 | Not Available | Negative | 106067 - 107287 | 44798.6 |
| abc transporter permease | AT705_RS00525 | Not Available | Negative | 107292 - 108653 | 51150.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
