Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | AT705_RS00430 | Not Available | Negative | 90329 - 91708 | 50408.4 |
| abc transporter substrate-binding protein | AT705_RS00435 | Not Available | Negative | 91808 - 92710 | 33742.7 |
| cysteine synthase a | AT705_RS00440 | P0A1E4 | Negative | 92903 - 93871 | 34092.1 |
| carbohydrate binding family 9 domain-containing protein | AT705_RS00445 | Not Available | Negative | 94074 - 96383 | 88140.1 |
| dicarboxylate/amino acid:cation symporter | AT705_RS00450 | Not Available | Positive | 96599 - 97765 | 40786.5 |
| uvry/sira/gaca family response regulator transcription factor | AT705_RS00455 | P66798 | Positive | 97972 - 98622 | 24106.3 |
| excinuclease abc subunit uvrc | AT705_RS00460 | Q3IIM0 | Positive | 98661 - 100484 | 68542.7 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | AT705_RS00465 | Q322L9 | Positive | 100528 - 101073 | 20299.3 |
| Trna-gly | Not Available | Not Available | Positive | 101258 - 101333 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 101365 - 101438 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
