Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triose-phosphate isomerase | AT705_RS00380 | Q3IE60 | Positive | 82854 - 83597 | 26221.0 |
| preprotein translocase subunit secg | AT705_RS00385 | P0AGA1 | Positive | 83602 - 83949 | 11901.2 |
| Trna-leu | Not Available | Not Available | Positive | 83960 - 84045 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 84128 - 84213 | Not Available |
| uvrd-helicase domain-containing protein | AT705_RS00400 | P15038 | Positive | 84316 - 86307 | 75257.3 |
| rimk family alpha-l-glutamate ligase | AT705_RS00405 | B5FBB1 | Positive | 86420 - 87397 | 35877.4 |
| hypothetical protein | AT705_RS00410 | Not Available | Negative | 87451 - 87681 | 8603.68 |
| 7-cyano-7-deazaguanine synthase quec | AT705_RS00415 | Q3IKE8 | Negative | 87813 - 88469 | 24181.8 |
| 7-carboxy-7-deazaguanine synthase quee | AT705_RS00420 | P64555 | Positive | 88700 - 89365 | 24778.7 |
| gyri-like domain-containing protein | AT705_RS00425 | Not Available | Negative | 89362 - 90342 | 37405.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
