Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium-dependent transporter | AT705_RS00330 | O07577 | Negative | 71227 - 72573 | 48034.6 |
| hamp domain-containing sensor histidine kinase | AT705_RS00335 | Q04943 | Negative | 72762 - 74072 | 48744.5 |
| response regulator transcription factor | AT705_RS00340 | P52108 | Negative | 74172 - 74879 | 26313.5 |
| hypothetical protein | AT705_RS00345 | Not Available | Negative | 75025 - 75831 | 29664.1 |
| serine hydrolase | AT705_RS00350 | Not Available | Positive | 75955 - 77184 | 45901.2 |
| ribosome assembly rna-binding protein yhby | AT705_RS00355 | P71376 | Negative | 77188 - 77484 | 11122.7 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | AT705_RS00360 | Q3IE64 | Positive | 77568 - 78197 | 23379.2 |
| atp-dependent zinc metalloprotease ftsh | AT705_RS00365 | Q6LUJ8 | Positive | 78266 - 80200 | 70448.6 |
| dihydropteroate synthase | AT705_RS00370 | P43776 | Positive | 80592 - 81437 | 30504.8 |
| phosphoglucosamine mutase | AT705_RS00375 | Q3IE61 | Positive | 81434 - 82774 | 48063.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
