Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h:quinone oxidoreductase | AT705_RS00275 | Q9I509 | Negative | 58214 - 58765 | 19821.9 |
| arsenate reductase (glutaredoxin) | AT705_RS00280 | P76569 | Negative | 58770 - 59117 | 12874.5 |
| m48 family metalloprotease | AT705_RS00285 | Q9KQ40 | Negative | 59313 - 60764 | 54235.3 |
| hypothetical protein | AT705_RS00290 | Not Available | Negative | 60766 - 61431 | 25582.8 |
| ai-2e family transporter | AT705_RS00300 | P43969 | Positive | 61806 - 62882 | 39771.0 |
| aminotransferase class v-fold plp-dependent enzyme | AT705_RS00305 | P37030 | Positive | 63056 - 65299 | 81323.3 |
| laci family dna-binding transcriptional regulator | AT705_RS00310 | P37947 | Negative | 65335 - 66372 | 38117.3 |
| glucose-6-phosphate isomerase | AT705_RS00315 | Q3IKH4 | Positive | 66762 - 68402 | 60750.1 |
| glucose-6-phosphate dehydrogenase | AT705_RS00320 | Q9Z3S2 | Positive | 68873 - 70345 | 55358.0 |
| 6-phosphogluconolactonase | AT705_RS00325 | Q989A3 | Positive | 70345 - 71055 | 25307.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
