Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tmrna,resume consensus sequence (at 85): agtaatcgcaaacgacga | Not Available | Not Available | Positive | 48437 - 48793 | Not Available |
| duf342 domain-containing protein | AT705_RS00230 | Not Available | Positive | 49381 - 51015 | 59755.6 |
| ribonuclease t | AT705_RS00235 | Q084K7 | Negative | 51066 - 51728 | 24156.5 |
| ompa family protein | AT705_RS00240 | P46233 | Positive | 51983 - 52858 | 33192.5 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | AT705_RS00245 | Q3IF34 | Negative | 52908 - 54893 | 73843.6 |
| beta-ketoacyl-acp synthase i | AT705_RS00250 | P0A954 | Positive | 55074 - 56288 | 42628.6 |
| ssra-binding protein smpb | AT705_RS00255 | Q3IE36 | Negative | 56351 - 56830 | 18611.7 |
| srpbcc family protein | AT705_RS00260 | A5F376 | Positive | 56960 - 57397 | 16476.8 |
| rnfh family protein | AT705_RS00265 | Q3IE34 | Positive | 57394 - 57717 | 11845.3 |
| duf2069 domain-containing protein | AT705_RS00270 | Not Available | Negative | 57765 - 58217 | 17269.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
