Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vc2046/so_2500 family protein | AT705_RS04950 | Not Available | Negative | 1110389 - 1110910 | 19039.7 |
| Trna-tyr | Not Available | Not Available | Positive | 1111023 - 1111107 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 1111130 - 1111214 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 1111238 - 1111322 | Not Available |
| m48 family metallopeptidase | AT705_RS04970 | Not Available | Negative | 1111504 - 1112184 | 26165.6 |
| ion channel | AT705_RS04975 | Not Available | Positive | 1112257 - 1113237 | 37007.6 |
| hd domain-containing protein | AT705_RS04980 | P46144 | Negative | 1113234 - 1113881 | 23865.6 |
| class i sam-dependent methyltransferase | AT705_RS04985 | Q3IKJ0 | Positive | 1113965 - 1115155 | 44314.4 |
| s8 family peptidase | AT705_RS04990 | P16588 | Negative | 1115223 - 1117082 | 63442.8 |
| hypothetical protein | AT705_RS04995 | Not Available | Positive | 1117624 - 1118223 | 22576.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
