Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate hydratase | AT705_RS04900 | Q58690 | Negative | 1099890 - 1101416 | 54953.0 |
| aminodeoxychorismate synthase component i | AT705_RS04905 | P12679 | Positive | 1101642 - 1102985 | 49742.8 |
| coa pyrophosphatase | AT705_RS04910 | Q6D4L1 | Positive | 1102982 - 1103539 | 20151.4 |
| l-serine ammonia-lyase | AT705_RS04915 | O86564 | Positive | 1103735 - 1105111 | 49564.9 |
| hth-type transcriptional regulator cysb | AT705_RS04920 | P45600 | Negative | 1105199 - 1106176 | 35964.2 |
| hypothetical protein | AT705_RS04925 | Not Available | Positive | 1106455 - 1107216 | 28946.2 |
| ncs2 family permease | AT705_RS04930 | P31466 | Negative | 1107223 - 1108512 | 45271.8 |
| tetratricopeptide repeat protein | AT705_RS04935 | Not Available | Positive | 1108631 - 1109095 | 17242.6 |
| sula-like leucine-rich domain-containing protein | AT705_RS04940 | Not Available | Positive | 1109214 - 1109639 | 15980.1 |
| ychj family protein | AT705_RS04945 | Not Available | Positive | 1109746 - 1110111 | 13945.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
