Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AT705_RS04805 | Not Available | Negative | 1082632 - 1082955 | 11573.1 |
| rhomboid family intramembrane serine protease | AT705_RS04810 | Not Available | Negative | 1083010 - 1083591 | 20699.8 |
| ybab/ebfc family nucleoid-associated protein | AT705_RS04815 | Q3IKN3 | Negative | 1083678 - 1084004 | 12017.7 |
| dna polymerase iii subunit gamma/tau | AT705_RS04820 | P74876 | Negative | 1084072 - 1086561 | 90981.7 |
| adenine phosphoribosyltransferase | AT705_RS04825 | Q3IKN5 | Negative | 1086568 - 1087113 | 19563.8 |
| hypothetical protein | AT705_RS25940 | Not Available | Negative | 1087279 - 1087401 | 4241.19 |
| duf2063 domain-containing protein | AT705_RS04830 | Not Available | Negative | 1087549 - 1088295 | 28136.5 |
| duf692 domain-containing protein | AT705_RS04835 | A8FX91 | Negative | 1088295 - 1089131 | 31258.1 |
| hypothetical protein | AT705_RS04840 | Not Available | Negative | 1089157 - 1089591 | 14152.9 |
| pp_00946 | AT705_RS04845 | Not Available | Positive | 1089757 - 1090749 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
