Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6359 domain-containing protein | AT705_RS04755 | Not Available | Positive | 1072512 - 1074695 | 78005.0 |
| hypothetical protein | AT705_RS04760 | Not Available | Negative | 1074739 - 1076466 | 62229.8 |
| duf6279 family lipoprotein | AT705_RS04765 | Not Available | Negative | 1076666 - 1077505 | 33088.2 |
| class i sam-dependent methyltransferase | AT705_RS04770 | Not Available | Positive | 1077721 - 1078308 | 21275.2 |
| duf998 domain-containing protein | AT705_RS04775 | Not Available | Negative | 1078353 - 1078958 | 22659.9 |
| hypothetical protein | AT705_RS04780 | Not Available | Positive | 1079343 - 1079573 | 8689.35 |
| rna ligase rtcb family protein | AT705_RS04785 | Q8IIU6 | Positive | 1079960 - 1081120 | 42702.1 |
| peptide chain release factor h | AT705_RS04790 | P28369 | Positive | 1081117 - 1081746 | 23569.1 |
| hypothetical protein | AT705_RS04795 | Not Available | Positive | 1081795 - 1082022 | 8411.28 |
| duf1330 domain-containing protein | AT705_RS04800 | Not Available | Negative | 1082159 - 1082464 | 11640.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
