Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AT705_RS25620 | Not Available | Negative | 39559 - 39759 | 7262.59 |
| hypothetical protein | AT705_RS00180 | Not Available | Negative | 40131 - 40676 | 20260.4 |
| 3-oxoacyl-[acyl-carrier-protein] synthase iii c-terminal domain-containing protein | AT705_RS00185 | Q51725 | Positive | 40759 - 41031 | 9768.81 |
| hypothetical protein | AT705_RS00190 | Not Available | Positive | 41409 - 41762 | 13036.3 |
| hypothetical protein | AT705_RS00195 | Not Available | Positive | 41826 - 44069 | 80960.1 |
| hypothetical protein | AT705_RS00200 | Not Available | Negative | 44142 - 44978 | 30783.7 |
| mipa/ompv family protein | AT705_RS00205 | Not Available | Positive | 45198 - 46061 | 32618.2 |
| duf3019 domain-containing protein | AT705_RS00210 | Not Available | Positive | 46093 - 46521 | 15960.4 |
| serine hydrolase | AT705_RS00215 | P15555 | Positive | 46646 - 47842 | 43936.6 |
| tetratricopeptide repeat protein | AT705_RS00220 | Not Available | Positive | 48058 - 48375 | 12194.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
