Dehalococcoides mccartyi strain 11a5

Gram-positiveCocciNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Chloroflexota

Class

Dehalococcoidia

Order

Dehalococcoidales

Family

Dehalococcoidaceae

Genus

Dehalococcoides

Description

Dehalococcoides mccartyi strain 11a5 is a Gram-positive, cocci-shaped bacterium that exists as single cells and is classified as an anaerobic chemolithotroph. This strain thrives optimally at a temperature of 35.0 °C and is capable of utilizing various energy sources in its metabolic processes. D. mccartyi strain 11a5 has been identified in diverse habitats, which suggests its adaptability to different environmental conditions. As an anaerobic organism, D. mccartyi strain 11a5 plays a significant role in biogeochemical cycles, particularly in the reduction of halogenated compounds. This metabolic capability positions it as a key player in bioremediation efforts, where it can facilitate the detoxification of contaminated environments. The ability of this strain to thrive in multiple habitats underscores its ecological versatility and potential applications in environmental microbiology. Given its unique metabolic traits, D. mccartyi strain 11a5 may contribute significantly to the dehalogenation processes in anaerobic environments, highlighting its importance in both microbial ecology and bioremediation strategies. Its presence in varying habitats indicates a potential role in maintaining ecosystem health and stability, particularly in areas impacted by halogenated pollutants.

Taxonomy

KingdomBacillati
PhylumChloroflexota
ClassDehalococcoidia
OrderDehalococcoidales
FamilyDehalococcoidaceae
GenusDehalococcoides
SpeciesDehalococcoides mccartyi
Strainstrain 11a5

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Dehalococcoides mccartyi strain 11a5
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemolithotroph
PathogenicityNot Available

Genome Summary

Dehalococcoides mccartyi strain 11a5


Gene Summary

Adenine Count

388417 bp

Thymine Count

387270 bp

Guanine Count

343683 bp

Cytosine Count

342603 bp

Genome Length

1461973 bp

Protein-coding Genes

1504 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Antitoxin hicbDm11a5_RS04135Not Available-777169 - 7774389931.6
Antitoxin hicbDm11a5_RS04140Not Available-777442 - 77781314106.8
type ii toxin-antitoxin system hica family toxinDm11a5_RS04145Not Available-777840 - 7780768851.89
Terminase small subunitDm11a5_RS04155Not Available+778999 - 77952019472.6
Terminase gp2Dm11a5_RS04160Not Available+779532 - 78117562198.2
Portal proteinDm11a5_RS04165Not Available+781189 - 78241246125.1
Hypothetical proteinDm11a5_RS04170Not Available+782425 - 78318928301.9
Major head subunitDm11a5_RS04175Not Available+783190 - 78439843616.0
hypothetical proteinDm11a5_RS04180Not Available+784465 - 78528928561.9
Dna packaging/head-tail-connectorDm11a5_RS04185Not Available+785455 - 78603020987.9

Displaying genes 1 – 10 of 1580 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

40 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001362octadecanoateC18H35O2Chemical structure of octadecanoateNot available
Average283.4693Da
Monoisotopic283.263705364Da
BASm0001429decanoateC10H19O2Chemical structure of decanoateNot available
Average171.2567Da
Monoisotopic171.138504852Da
BASm0001774tetradecanoateC14H27O2Chemical structure of tetradecanoateNot available
Average227.363Da
Monoisotopic227.2011051Da
BASm0001775(9Z)-octadecenoateC18H33O2Chemical structure of (9Z)-octadecenoateNot available
Average281.4534Da
Monoisotopic281.2480553Da
BASm0001795pentanoateC5H9O2Chemical structure of pentanoateNot available
Average101.126Da
Monoisotopic101.0608031Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00019773,4-dihydroxybenzoateC7H5O4Chemical structure of 3,4-dihydroxybenzoateNot available
Average153.114Da
Monoisotopic153.019332221Da

Displaying 1–10 of 40 metabolites