Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas chlororaphis |
| Strain | strain UFB2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nodules of Chamaecytisus albus; rhizosphere; root nodules |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Brassica napus var. napus, Persea americana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1226359 bp
Thymine Count
1188330 bp
Guanine Count
1928553 bp
Cytosine Count
2017005 bp
Genome Length
6360256 bp
Protein-coding Genes
5533 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylr family transcriptional regulator | VM99_RS00255 | P0ACI5 | Negative | 55796 - 56977 | 43101.0 |
| xylose isomerase | VM99_RS00260 | Q3KDW0 | Positive | 57129 - 58445 | 49147.9 |
| d-xylose abc transporter substrate-binding protein | VM99_RS00265 | P37387 | Positive | 58593 - 59594 | 35972.3 |
| d-xylose abc transporter atp-binding protein | VM99_RS00270 | Q48J74 | Positive | 59772 - 61328 | 56305.5 |
| sugar abc transporter permease | VM99_RS00275 | P0AGI6 | Positive | 61329 - 62465 | 39904.2 |
| bifunctional diguanylate cyclase/phosphodiesterase | VM99_RS00280 | Not Available | Positive | 62664 - 65018 | 87650.3 |
| phosphate abc transporter substrate-binding protein | VM99_RS00285 | Not Available | Negative | 65022 - 65471 | 15637.8 |
| porin | VM99_RS00290 | Not Available | Negative | 65471 - 66709 | 45261.8 |
| atp-binding protein | VM99_RS00295 | Not Available | Negative | 66902 - 68791 | 68772.8 |
| epoxide hydrolase family protein | VM99_RS00300 | Q06816 | Positive | 69500 - 70639 | 42099.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









