Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas chlororaphis |
| Strain | strain UFB2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nodules of Chamaecytisus albus; rhizosphere; root nodules |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Brassica napus var. napus, Persea americana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1226359 bp
Thymine Count
1188330 bp
Guanine Count
1928553 bp
Cytosine Count
2017005 bp
Genome Length
6360256 bp
Protein-coding Genes
5533 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit beta family protein | VM99_RS03860 | P40875 | Positive | 893563 - 894813 | 45259.1 |
| sarcosine oxidase subunit delta | VM99_RS03865 | Q46336 | Positive | 894832 - 895161 | 12505.6 |
| sarcosine oxidase subunit alpha | VM99_RS03870 | Q46337 | Positive | 895158 - 898175 | 109545.0 |
| sarcosine oxidase subunit gamma | VM99_RS03875 | Q46338 | Positive | 898366 - 898998 | 22820.2 |
| formyltetrahydrofolate deformylase | VM99_RS03880 | Not Available | Positive | 899191 - 900048 | 32259.6 |
| formaldehyde dehydrogenase, glutathione-independent | VM99_RS03885 | P46154 | Positive | 900268 - 901467 | 42205.9 |
| rhs repeat-associated core domain-containing protein | VM99_RS27990 | Not Available | Negative | 901631 - 902680 | 39231.2 |
| cold-shock protein | VM99_RS03890 | Not Available | Negative | 902705 - 902917 | 7761.15 |
| hypothetical protein | VM99_RS03895 | Not Available | Negative | 903255 - 903833 | 21075.8 |
| duf2780 domain-containing protein | VM99_RS03900 | Not Available | Positive | 904012 - 904590 | 19127.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









