Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas chlororaphis |
| Strain | strain UFB2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nodules of Chamaecytisus albus; rhizosphere; root nodules |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Brassica napus var. napus, Persea americana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1226359 bp
Thymine Count
1188330 bp
Guanine Count
1928553 bp
Cytosine Count
2017005 bp
Genome Length
6360256 bp
Protein-coding Genes
5533 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline abc transporter atp-binding protein | VM99_RS03710 | P17328 | Negative | 854121 - 855299 | 43586.2 |
| choline abc transporter permease subunit | VM99_RS03715 | P46921 | Negative | 855296 - 856141 | 30238.3 |
| choline abc transporter substrate-binding protein | VM99_RS03720 | Not Available | Negative | 856212 - 857159 | 34081.9 |
| l-serine ammonia-lyase | VM99_RS03725 | Not Available | Positive | 857584 - 858960 | 49089.2 |
| glxa family transcriptional regulator | VM99_RS03730 | Not Available | Positive | 859544 - 860647 | 40919.5 |
| hypothetical protein | VM99_RS03735 | Not Available | Negative | 860692 - 860955 | 9632.6 |
| gamma-butyrobetaine dioxygenase | VM99_RS03740 | P80193 | Negative | 861255 - 862418 | 44179.5 |
| thioesterase family protein | VM99_RS03745 | Not Available | Negative | 862438 - 862914 | 17768.2 |
| l-carnitine dehydrogenase | VM99_RS03750 | Q4ZSC0 | Negative | 863090 - 864055 | 34650.5 |
| 3-keto-5-aminohexanoate cleavage protein | VM99_RS03755 | Q8RHX2 | Negative | 864195 - 865082 | 31494.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









