Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas chlororaphis |
| Strain | strain UFB2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nodules of Chamaecytisus albus; rhizosphere; root nodules |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Brassica napus var. napus, Persea americana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1226359 bp
Thymine Count
1188330 bp
Guanine Count
1928553 bp
Cytosine Count
2017005 bp
Genome Length
6360256 bp
Protein-coding Genes
5533 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system atpase tssh | VM99_RS27165 | Not Available | Negative | 6219118 - 6221703 | 94723.0 |
| type vi secretion system baseplate subunit tssg | VM99_RS27170 | Not Available | Negative | 6221716 - 6222720 | 38301.4 |
| type vi secretion system baseplate subunit tssf | VM99_RS27175 | Q9I744 | Negative | 6222684 - 6224471 | 67782.2 |
| type vi secretion system baseplate subunit tsse | VM99_RS27180 | Not Available | Negative | 6224478 - 6224888 | 14796.0 |
| type vi secretion system contractile sheath large subunit | VM99_RS27185 | Q9I748 | Negative | 6224898 - 6226373 | 55548.9 |
| type vi secretion system contractile sheath small subunit | VM99_RS27190 | Not Available | Negative | 6226378 - 6226887 | 18563.5 |
| type vi secretion system protein tssa | VM99_RS27195 | Not Available | Negative | 6226919 - 6228475 | 59100.2 |
| type vi secretion system tip protein tssi/vgrg | VM99_RS27200 | Not Available | Positive | 6228906 - 6230987 | 78236.3 |
| duf4123 domain-containing protein | VM99_RS27205 | Not Available | Positive | 6230984 - 6231835 | 32713.5 |
| hypothetical protein | VM99_RS27210 | Not Available | Positive | 6231832 - 6232602 | 28859.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









