Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas chlororaphis |
| Strain | strain UFB2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nodules of Chamaecytisus albus; rhizosphere; root nodules |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Brassica napus var. napus, Persea americana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1226359 bp
Thymine Count
1188330 bp
Guanine Count
1928553 bp
Cytosine Count
2017005 bp
Genome Length
6360256 bp
Protein-coding Genes
5533 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-hexose-6-phosphate mutarotase | VM99_RS27120 | Q40784 | Positive | 6207789 - 6208688 | 33337.3 |
| serine/threonine-protein kinase | VM99_RS27125 | Q9XBQ0 | Negative | 6208747 - 6209628 | 32551.5 |
| pp2c family serine/threonine-protein phosphatase | VM99_RS27130 | O34779 | Negative | 6209676 - 6210401 | 26345.5 |
| type vi secretion system membrane subunit tssm | VM99_RS27135 | Q9I755 | Negative | 6210401 - 6213883 | 131526.0 |
| type ivb secretion system protein icmh/dotu | VM99_RS27140 | Not Available | Negative | 6213897 - 6214760 | 32247.2 |
| type vi secretion system baseplate subunit tssk | VM99_RS27145 | Q9I753 | Negative | 6214766 - 6216097 | 49652.9 |
| type vi secretion system lipoprotein tssj | VM99_RS27150 | Not Available | Negative | 6216094 - 6216588 | 18230.9 |
| type vi secretion system-associated fha domain protein tagh | VM99_RS28625 | Not Available | Negative | 6216594 - 6217370 | 28658.1 |
| type vi secretion protein | VM99_RS30105 | Not Available | Negative | 6217389 - 6217529 | 5094.07 |
| sigma-54-dependent fis family transcriptional regulator | VM99_RS27160 | P14375 | Negative | 6217590 - 6219107 | 56168.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









