Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas chlororaphis |
| Strain | strain UFB2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nodules of Chamaecytisus albus; rhizosphere; root nodules |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Brassica napus var. napus, Persea americana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1226359 bp
Thymine Count
1188330 bp
Guanine Count
1928553 bp
Cytosine Count
2017005 bp
Genome Length
6360256 bp
Protein-coding Genes
5533 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha | VM99_RS23310 | P09060 | Positive | 5351968 - 5353203 | 45296.1 |
| alpha-ketoacid dehydrogenase subunit beta | VM99_RS23315 | P09061 | Positive | 5353205 - 5354263 | 38557.9 |
| dihydrolipoamide acetyltransferase family protein | VM99_RS23320 | P09062 | Positive | 5354264 - 5355541 | 45297.8 |
| dihydrolipoyl dehydrogenase | VM99_RS23325 | P09063 | Positive | 5355556 - 5356941 | 48562.8 |
| branched-chain amino acid aminotransferase | VM99_RS23330 | P54689 | Positive | 5357224 - 5358243 | 36906.1 |
| helix-turn-helix transcriptional regulator | VM99_RS23335 | Not Available | Negative | 5358295 - 5359047 | 26914.6 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | VM99_RS23340 | Q6BX45 | Negative | 5359138 - 5359479 | 12479.0 |
| m4 family metallopeptidase | VM99_RS23345 | Q99132 | Positive | 5359650 - 5360711 | 38751.2 |
| protealysin inhibitor emfourin | VM99_RS23350 | Not Available | Positive | 5360711 - 5361034 | 12056.4 |
| rcnb family protein | VM99_RS23355 | Not Available | Negative | 5361039 - 5361347 | 11020.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









