Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas chlororaphis |
| Strain | strain UFB2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nodules of Chamaecytisus albus; rhizosphere; root nodules |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Brassica napus var. napus, Persea americana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1226359 bp
Thymine Count
1188330 bp
Guanine Count
1928553 bp
Cytosine Count
2017005 bp
Genome Length
6360256 bp
Protein-coding Genes
5533 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tsse | VM99_RS23010 | Not Available | Positive | 5278750 - 5279193 | 16731.8 |
| type vi secretion system baseplate subunit tssf | VM99_RS23015 | Not Available | Positive | 5279177 - 5280967 | 66034.7 |
| type vi secretion system baseplate subunit tssg | VM99_RS23020 | Not Available | Positive | 5280931 - 5281956 | 37026.6 |
| type vi secretion system atpase tssh | VM99_RS23025 | Q9I742 | Positive | 5281958 - 5284501 | 92441.1 |
| endonuclease/exonuclease/phosphatase family protein | VM99_RS23030 | Not Available | Positive | 5284536 - 5285204 | 24330.8 |
| type vi secretion system tip protein vgrg | VM99_RS23035 | Q9I737 | Positive | 5285209 - 5287218 | 72250.5 |
| toxin-antitoxin system ywqk family antitoxin | VM99_RS23040 | Not Available | Positive | 5287232 - 5287774 | 20119.5 |
| duf4280 domain-containing protein | VM99_RS23045 | Not Available | Negative | 5287988 - 5288383 | 13268.8 |
| phosphotransferase family protein | VM99_RS23050 | Q5R778 | Positive | 5288557 - 5289624 | 40913.8 |
| sdr family oxidoreductase | VM99_RS23055 | Q9GKX2 | Positive | 5289650 - 5290417 | 26702.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









