Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas chlororaphis |
| Strain | strain UFB2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nodules of Chamaecytisus albus; rhizosphere; root nodules |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Brassica napus var. napus, Persea americana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1226359 bp
Thymine Count
1188330 bp
Guanine Count
1928553 bp
Cytosine Count
2017005 bp
Genome Length
6360256 bp
Protein-coding Genes
5533 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine transporter | VM99_RS22960 | P0AAD7 | Negative | 5265645 - 5266925 | 46083.6 |
| 2-hydroxyacid dehydrogenase | VM99_RS22965 | Q65CJ7 | Positive | 5267227 - 5268180 | 33718.9 |
| type vi secretion system protein tssa | VM99_RS22970 | Not Available | Negative | 5268221 - 5269303 | 40665.9 |
| type vi secretion protein icmf/tssm n-terminal domain-containing protein | VM99_RS22975 | Not Available | Negative | 5269300 - 5273157 | 144334.0 |
| dotu family type iv/vi secretion system protein | VM99_RS22980 | Not Available | Negative | 5273154 - 5273915 | 28165.9 |
| type vi secretion system baseplate subunit tssk | VM99_RS22985 | Not Available | Negative | 5273934 - 5275265 | 48092.9 |
| hypothetical protein | VM99_RS22990 | Not Available | Negative | 5275315 - 5275767 | 16952.1 |
| type vi secretion system contractile sheath small subunit | VM99_RS22995 | Not Available | Positive | 5275991 - 5276551 | 20859.7 |
| type vi secretion system contractile sheath large subunit | VM99_RS23000 | Not Available | Positive | 5276582 - 5278063 | 54963.2 |
| hcp family type vi secretion system effector | VM99_RS23005 | Not Available | Positive | 5278240 - 5278737 | 17592.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









