Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas chlororaphis |
| Strain | strain UFB2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nodules of Chamaecytisus albus; rhizosphere; root nodules |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Brassica napus var. napus, Persea americana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1226359 bp
Thymine Count
1188330 bp
Guanine Count
1928553 bp
Cytosine Count
2017005 bp
Genome Length
6360256 bp
Protein-coding Genes
5533 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | VM99_RS01940 | Q9HTK9 | Positive | 471041 - 472189 | 40250.9 |
| hu family dna-binding protein | VM99_RS01945 | Q9HTL0 | Positive | 472381 - 472656 | 9880.96 |
| hypothetical protein | VM99_RS01950 | Not Available | Negative | 472757 - 473035 | 10628.9 |
| rhs repeat-associated core domain-containing protein | VM99_RS01955 | Not Available | Negative | 473037 - 477479 | 164456.0 |
| dcrb-related protein | VM99_RS01960 | Not Available | Negative | 477492 - 477926 | 16036.3 |
| type vi secretion system tip protein vgrg | VM99_RS01965 | Q9I741 | Negative | 477945 - 479876 | 71944.0 |
| type vi secretion system atpase tssh | VM99_RS01970 | Not Available | Negative | 480045 - 482735 | 98256.7 |
| type vi secretion system baseplate subunit tssg | VM99_RS01975 | Not Available | Negative | 482728 - 483780 | 39729.9 |
| type vi secretion system baseplate subunit tssf | VM99_RS01980 | Not Available | Negative | 483744 - 485603 | 69177.5 |
| type vi secretion system baseplate subunit tsse | VM99_RS01985 | Q9I745 | Negative | 485600 - 486112 | 18708.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









