Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas chlororaphis |
| Strain | strain UFB2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nodules of Chamaecytisus albus; rhizosphere; root nodules |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Brassica napus var. napus, Persea americana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1226359 bp
Thymine Count
1188330 bp
Guanine Count
1928553 bp
Cytosine Count
2017005 bp
Genome Length
6360256 bp
Protein-coding Genes
5533 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-carboxy-cis,cis-muconate cycloisomerase | VM99_RS21085 | Q9I6Q8 | Positive | 4815456 - 4816820 | 48594.6 |
| 3-oxoadipate enol-lactonase | VM99_RS21090 | P00632 | Positive | 4816833 - 4817624 | 28550.0 |
| 4-carboxymuconolactone decarboxylase | VM99_RS21095 | Not Available | Positive | 4817635 - 4818027 | 14778.6 |
| oprd family porin | VM99_RS21100 | Not Available | Negative | 4818503 - 4819756 | 45652.4 |
| duf6124 family protein | VM99_RS21105 | Not Available | Positive | 4820734 - 4821087 | 12711.0 |
| hypothetical protein | VM99_RS29785 | Not Available | Negative | 4821150 - 4821293 | 5071.09 |
| adec/adek/oprm family multidrug efflux complex outer membrane factor | VM99_RS21110 | Q9KJC1 | Negative | 4821589 - 4823046 | 52588.8 |
| efflux rnd transporter permease subunit emhb | VM99_RS21115 | P0C070 | Negative | 4823043 - 4826207 | 113312.0 |
| efflux rnd transporter periplasmic adaptor subunit | VM99_RS21120 | P0C069 | Negative | 4826211 - 4827368 | 41096.0 |
| tetr family transcriptional regulator | VM99_RS21125 | Q9KJC4 | Positive | 4827631 - 4828263 | 23900.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









