Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas chlororaphis |
| Strain | strain UFB2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nodules of Chamaecytisus albus; rhizosphere; root nodules |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Brassica napus var. napus, Persea americana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1226359 bp
Thymine Count
1188330 bp
Guanine Count
1928553 bp
Cytosine Count
2017005 bp
Genome Length
6360256 bp
Protein-coding Genes
5533 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion system protein | VM99_RS15470 | Not Available | Negative | 3490936 - 3491502 | 21059.9 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | VM99_RS15475 | P41786 | Negative | 3491489 - 3492211 | 26200.8 |
| type iii secretion system inner rod subunit scti | VM99_RS15480 | Not Available | Negative | 3492208 - 3492516 | 11071.3 |
| type iii secretion system needle filament subunit sctf | VM99_RS15485 | P41784 | Negative | 3492575 - 3492835 | 9285.0 |
| prgh/eprh family type iii secretion apparatus protein | VM99_RS15490 | P41783 | Negative | 3492843 - 3494018 | 42432.6 |
| transglycosylase slt domain-containing protein | VM99_RS15495 | E1WAC2 | Negative | 3494145 - 3494639 | 18129.6 |
| winged helix-turn-helix domain-containing protein | VM99_RS15500 | P43016 | Negative | 3494636 - 3495772 | 41161.8 |
| glycerophosphodiester phosphodiesterase family protein | VM99_RS15505 | Not Available | Negative | 3496139 - 3497407 | 46775.4 |
| ipad/sipd/sspd family type iii secretion system needle tip protein | VM99_RS15515 | Q5PEC2 | Negative | 3497750 - 3498841 | 40313.9 |
| cell invasion protein | VM99_RS15520 | Not Available | Negative | 3498855 - 3499907 | 38031.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









