Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas chlororaphis |
| Strain | strain UFB2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nodules of Chamaecytisus albus; rhizosphere; root nodules |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Brassica napus var. napus, Persea americana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1226359 bp
Thymine Count
1188330 bp
Guanine Count
1928553 bp
Cytosine Count
2017005 bp
Genome Length
6360256 bp
Protein-coding Genes
5533 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | VM99_RS15175 | Q51344 | Negative | 3418888 - 3420000 | 40448.1 |
| 3-isopropylmalate dehydrogenase | VM99_RS15180 | Q4KF05 | Negative | 3420055 - 3421137 | 38826.8 |
| class i sam-dependent methyltransferase | VM99_RS15185 | P30866 | Negative | 3421202 - 3421966 | 28175.3 |
| 3-isopropylmalate dehydratase small subunit | VM99_RS15190 | Q4KF07 | Negative | 3422116 - 3422760 | 24125.4 |
| 3-isopropylmalate dehydratase large subunit | VM99_RS15195 | Q4KF08 | Negative | 3422772 - 3424190 | 50655.7 |
| lysr family transcriptional regulator | VM99_RS15200 | P96194 | Positive | 3424347 - 3425237 | 32540.6 |
| bifunctional diguanylate cyclase/phosphodiesterase | VM99_RS15205 | Not Available | Positive | 3425307 - 3428585 | 122752.0 |
| hsp20 family protein | VM99_RS15210 | P96193 | Negative | 3428646 - 3429098 | 16587.6 |
| trna-dihydrouridine synthase | VM99_RS15215 | Q88LF2 | Negative | 3429219 - 3430178 | 35173.8 |
| thioesterase family protein | VM99_RS15220 | Not Available | Negative | 3430425 - 3430883 | 17413.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









