Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas chlororaphis |
| Strain | strain UFB2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nodules of Chamaecytisus albus; rhizosphere; root nodules |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Brassica napus var. napus, Persea americana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1226359 bp
Thymine Count
1188330 bp
Guanine Count
1928553 bp
Cytosine Count
2017005 bp
Genome Length
6360256 bp
Protein-coding Genes
5533 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | VM99_RS13370 | P07109 | Positive | 3023267 - 3024031 | 28238.3 |
| ligase-associated dna damage response dexh box helicase | VM99_RS13375 | O27830 | Positive | 3024232 - 3026718 | 91444.3 |
| ligase-associated dna damage response endonuclease pdem | VM99_RS13380 | Not Available | Positive | 3026718 - 3027374 | 23910.9 |
| hypothetical protein | VM99_RS13385 | Not Available | Negative | 3027388 - 3027594 | 7125.39 |
| dctp deaminase | VM99_RS13390 | Q48LT4 | Negative | 3027695 - 3028261 | 21321.4 |
| cold-shock protein | VM99_RS13395 | P0A106 | Positive | 3028615 - 3028824 | 7727.11 |
| duf481 domain-containing protein | VM99_RS13400 | Not Available | Negative | 3029023 - 3030030 | 38077.5 |
| mgmt family protein | VM99_RS13405 | Not Available | Positive | 3030192 - 3030545 | 12677.2 |
| ampg family muropeptide mfs transporter | VM99_RS13410 | Q92I85 | Positive | 3030590 - 3032149 | 56600.5 |
| proline--trna ligase | VM99_RS13415 | Q3KH16 | Positive | 3032278 - 3033993 | 63210.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









