Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas chlororaphis |
| Strain | strain UFB2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nodules of Chamaecytisus albus; rhizosphere; root nodules |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Brassica napus var. napus, Persea americana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1226359 bp
Thymine Count
1188330 bp
Guanine Count
1928553 bp
Cytosine Count
2017005 bp
Genome Length
6360256 bp
Protein-coding Genes
5533 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyprenyl diphosphate synthase | VM99_RS11995 | Q88MH6 | Negative | 2725608 - 2726363 | 28115.8 |
| ribosome recycling factor | VM99_RS12000 | C3K5Z8 | Negative | 2726377 - 2726934 | 20190.3 |
| ump kinase | VM99_RS12005 | Q4KHH4 | Negative | 2726931 - 2727674 | 26608.5 |
| translation elongation factor ts | VM99_RS12010 | Q4ZWS7 | Negative | 2727930 - 2728796 | 30466.7 |
| 30s ribosomal protein s2 | VM99_RS12015 | C3K5E6 | Negative | 2728991 - 2729728 | 27047.8 |
| type i methionyl aminopeptidase | VM99_RS12020 | Not Available | Positive | 2730088 - 2730870 | 28839.8 |
| [protein-pii] uridylyltransferase | VM99_RS12025 | Q3KHB4 | Positive | 2730918 - 2733620 | 103226.0 |
| succinyldiaminopimelate transaminase | VM99_RS12030 | O50434 | Positive | 2733758 - 2734957 | 43955.6 |
| duf6124 family protein | VM99_RS12035 | Not Available | Negative | 2735274 - 2735633 | 13085.6 |
| duf3800 domain-containing protein | VM99_RS12040 | Not Available | Positive | 2736075 - 2737169 | 41289.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









