Ramlibacter tataouinensis strain 5-10

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Ramlibacter

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRamlibacter
SpeciesRamlibacter tataouinensis
Strainstrain 5-10

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ramlibacter tataouinensis strain 5-10

NZ_CP010951.1

Gene Summary

Adenine Count

799150 bp

Thymine Count

792345 bp

Guanine Count

1665037 bp

Cytosine Count

1660098 bp

Genome Length

4916630 bp

Protein-coding Genes

4597 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf192 domain-containing proteinUC35_RS00005Not Available+187 - 63916408.2
superoxide dismutaseUC35_RS00010P37369-715 - 129621739.5
exodeoxyribonuclease vii large subunitUC35_RS00015A9BWI7-1371 - 266347210.4
mota/tolq/exbb proton channel family proteinUC35_RS00020P72604+2998 - 363022449.4
biopolymer transporter exbdUC35_RS00025Not Available+3627 - 405215441.6
tetraacyldisaccharide 4'-kinaseUC35_RS00030A1W892+4052 - 501435137.6
trm112 family proteinUC35_RS00035A1VNK4+5022 - 52287828.56
3-deoxy-manno-octulosonate cytidylyltransferaseUC35_RS00040C5CKW0+5263 - 603327157.6
adenylate kinaseUC35_RS00045Q129C6+6164 - 682023632.5
duf6152 family proteinUC35_RS00050Not Available-6827 - 728816757.3

Displaying genes 1 – 10 of 4654 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

342 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 342 metabolites