Pandoraea vervacti strain NS15

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Pandoraea

Description

Pandoraea vervacti strain NS15 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain possesses two replicons, which are typically indicative of a complex genomic organization that may contribute to its adaptability and survival in various environments. The strain is associated with two specific GenBank accessions, NZ_CP010898.2 and NZ_CP010897.2, which provide a basis for further genetic and genomic studies. The presence of multiple replicons in Pandoraea vervacti strain NS15 may suggest a versatile metabolic capacity, allowing it to thrive in diverse ecological niches. This adaptability is vital for its role in various biogeochemical cycles, particularly in environments impacted by anthropogenic activities. Understanding the genomic organization and functions of this strain can offer insights into its ecological roles and potential applications in biotechnology or environmental remediation. In summary, Pandoraea vervacti strain NS15's Gram-negative classification, rod-shaped structure, dual replicons, and specific accessions highlight its unique biological characteristics, which may play a significant role in its ecological interactions and potential utility in scientific applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPandoraea
SpeciesPandoraea vervacti
Strainstrain NS15

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pandoraea vervacti strain NS15 chromosome, complete genome.

Gene Summary

Adenine Count

1024312 bp

Thymine Count

1029799 bp

Guanine Count

1788125 bp

Cytosine Count

1793764 bp

Genome Length

5636000 bp

Protein-coding Genes

4805 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation initiation factor if-1UC34_RS22190Not AvailableNegative5088535 - 50887568393.09
cbs domain-containing proteinUC34_RS22195Not AvailablePositive5089355 - 508983117336.2
mfs transporterUC34_RS22200Not AvailableNegative5089955 - 509144851592.5
glycine zipper 2tm domain-containing proteinUC34_RS22205Not AvailablePositive5091926 - 509245318240.7
undecaprenyl-phosphate glucose phosphotransferaseUC34_RS22210Not AvailablePositive5092775 - 509419052418.4
wecb/taga/cpsf family glycosyltransferaseUC34_RS22215Not AvailableNegative5094308 - 509512330393.0
hypothetical proteinUC34_RS25520Not AvailablePositive5095122 - 509552614980.0
fad-dependent oxidoreductaseUC34_RS22220Not AvailablePositive5095489 - 509721361752.4
nad-dependent epimerase/dehydratase family proteinUC34_RS22225Not AvailablePositive5097227 - 509816232449.2
oligosaccharide flippase family proteinUC34_RS22230Not AvailableNegative5098268 - 509960846008.6

Displaying genes 4411 – 4420 of 4982 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.