Pandoraea vervacti strain NS15

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Pandoraea

Description

Pandoraea vervacti strain NS15 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain possesses two replicons, which are typically indicative of a complex genomic organization that may contribute to its adaptability and survival in various environments. The strain is associated with two specific GenBank accessions, NZ_CP010898.2 and NZ_CP010897.2, which provide a basis for further genetic and genomic studies. The presence of multiple replicons in Pandoraea vervacti strain NS15 may suggest a versatile metabolic capacity, allowing it to thrive in diverse ecological niches. This adaptability is vital for its role in various biogeochemical cycles, particularly in environments impacted by anthropogenic activities. Understanding the genomic organization and functions of this strain can offer insights into its ecological roles and potential applications in biotechnology or environmental remediation. In summary, Pandoraea vervacti strain NS15's Gram-negative classification, rod-shaped structure, dual replicons, and specific accessions highlight its unique biological characteristics, which may play a significant role in its ecological interactions and potential utility in scientific applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPandoraea
SpeciesPandoraea vervacti
Strainstrain NS15

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pandoraea vervacti strain NS15


Gene Summary

Adenine Count

19543 bp

Thymine Count

18681 bp

Guanine Count

31173 bp

Cytosine Count

30885 bp

Genome Length

100282 bp

Protein-coding Genes

97 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosomal replication initiator protein dnaaUC34_RS00005Not AvailablePositive1 - 156657816.9
dna polymerase iii subunit betaUC34_RS00010Not AvailablePositive1816 - 292241169.5
dna topoisomerase (atp-hydrolyzing) subunit bUC34_RS00015Not AvailablePositive3104 - 558191122.6
oxidoreductase, molybdopterin binding proteinUC34_RS25255Not AvailableNegative5770 - 688739735.0
duf6216 family proteinUC34_RS00030Not AvailableNegative7053 - 788030697.6
duf3892 domain-containing proteinUC34_RS00035Not AvailableNegative7979 - 81827586.1
is21 family transposaseUC34_RS00040Not AvailablePositive8344 - 983756959.9
is21-like element helper atpase istbUC34_RS00045Not AvailablePositive9834 - 1065530491.6
hypothetical proteinUC34_RS25660Not AvailableNegative10652 - 108256457.58
restriction endonuclease subunit sUC34_RS00050Not AvailablePositive10942 - 1152921634.3

Displaying genes 1 – 10 of 4982 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.