Pandoraea vervacti strain NS15

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Pandoraea

Description

Pandoraea vervacti strain NS15 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain possesses two replicons, which are typically indicative of a complex genomic organization that may contribute to its adaptability and survival in various environments. The strain is associated with two specific GenBank accessions, NZ_CP010898.2 and NZ_CP010897.2, which provide a basis for further genetic and genomic studies. The presence of multiple replicons in Pandoraea vervacti strain NS15 may suggest a versatile metabolic capacity, allowing it to thrive in diverse ecological niches. This adaptability is vital for its role in various biogeochemical cycles, particularly in environments impacted by anthropogenic activities. Understanding the genomic organization and functions of this strain can offer insights into its ecological roles and potential applications in biotechnology or environmental remediation. In summary, Pandoraea vervacti strain NS15's Gram-negative classification, rod-shaped structure, dual replicons, and specific accessions highlight its unique biological characteristics, which may play a significant role in its ecological interactions and potential utility in scientific applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPandoraea
SpeciesPandoraea vervacti
Strainstrain NS15

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pandoraea vervacti strain NS15 chromosome, complete genome.

Gene Summary

Adenine Count

1024312 bp

Thymine Count

1029799 bp

Guanine Count

1788125 bp

Cytosine Count

1793764 bp

Genome Length

5636000 bp

Protein-coding Genes

4805 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion system export apparatus subunit scttUC34_RS00965Not AvailablePositive222922 - 22370127492.1
escu/yscu/hrcu family type iii secretion system export apparatus switch proteinUC34_RS00970Not AvailablePositive223707 - 22507750393.9
type iii secretion system translocator chaperone sicaUC34_RS26035Not AvailablePositive225197 - 22653148918.8
type iii secretion system translocon subunit scteUC34_RS00980Not AvailablePositive226528 - 22826760634.4
hypothetical proteinUC34_RS00985Not AvailablePositive228279 - 22935236996.1
ipad/sipd/sspd family type iii secretion system needle tip proteinUC34_RS00990Not AvailablePositive229381 - 23055942307.5
hypothetical proteinUC34_RS00995Not AvailablePositive230625 - 23109216962.8
winged helix-turn-helix domain-containing proteinUC34_RS01000Not AvailableNegative231151 - 23280962112.7
hypothetical proteinUC34_RS01005Not AvailablePositive233283 - 23360912429.1
hypothetical proteinUC34_RS01010Not AvailablePositive233606 - 23393512070.7

Displaying genes 191 – 200 of 4982 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.