Phaeobacter piscinae strain P36

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Phaeobacter

Description

Phaeobacter piscinae strain P36 is a Gram-negative, rod-shaped bacterium primarily isolated from a turbot rearing facility. This strain is notable for its genetic complexity, possessing four replicons, which may contribute to its adaptability and functionality in aquatic environments. The presence of multiple replicons can facilitate various metabolic processes and enhance genetic diversity, potentially allowing P. piscinae to thrive in the dynamic conditions of fish rearing facilities. The habitat of P. piscinae indicates its ecological niche, where it likely plays a role in the microbiome associated with turbot aquaculture. Bacteria in such environments can influence water quality, nutrient cycling, and the health of aquatic organisms. The ability of P. piscinae to inhabit this specific environment suggests it may possess traits that allow it to interact positively with fish and other microorganisms, possibly through mechanisms such as biofilm formation, nutrient assimilation, or antimicrobial activity. The genomic accessions associated with P. piscinae strain P36—NZ_CP010643.1, NZ_CP010646.1, NZ_CP010647.1, and NZ_CP010648.1—provide a basis for further research into its genetic capabilities and ecological functions. Understanding the role of Phaeobacter piscinae in aquaculture could lead to improved practices in fish farming, enhancing both productivity and sustainability in the industry.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPhaeobacter
SpeciesPhaeobacter piscinae
Strainstrain P36

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatturbot rearing facility
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phaeobacter piscinae strain P36


Gene Summary

Adenine Count

716298 bp

Thymine Count

717055 bp

Guanine Count

1089349 bp

Cytosine Count

1090462 bp

Genome Length

3613164 bp

Protein-coding Genes

3326 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
replication initiator protein aPhaeoP36_RS19555Not AvailableNegative1 - 101437783.8
aaa family atpasePhaeoP36_RS19560Not AvailablePositive1511 - 292652379.8
parb/repb/spo0j family partition proteinPhaeoP36_RS19565Not AvailablePositive3029 - 415640104.8
udp-glucose dehydrogenase family proteinPhaeoP36_RS19570Not AvailableNegative4243 - 554746866.4
nad-dependent epimerase/dehydratase family proteinPhaeoP36_RS19575Not AvailableNegative5849 - 685936836.0
glycosyltransferasePhaeoP36_RS19580Not AvailablePositive7013 - 805938345.8
abc transporter permeasePhaeoP36_RS19585Not AvailableNegative8068 - 896432570.5
sugar transporterPhaeoP36_RS19590Not AvailablePositive9081 - 1051152160.3
abc transporter atp-binding proteinPhaeoP36_RS19595Not AvailablePositive10529 - 1118524335.3
udp-galactopyranose mutasePhaeoP36_RS19600Not AvailablePositive11346 - 1249743307.7

Displaying genes 1 – 10 of 3635 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.