Escherichia coli strain C5

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain C5 is a Gram-negative, rod-shaped bacterium that exists in pairs or singles and is characterized as a facultative anaerobe. It thrives optimally at 37°C and falls within the mesophilic temperature range, indicating its preference for moderate temperatures. This strain possesses flagella, allowing for mobility, and has a complex cellular structure with two membranes and two replicons. E. coli C5 is primarily host-associated, showing a diverse range of hosts that includes Homo sapiens, various domesticated animals such as Gallus gallus (chickens), Bos taurus (cattle), Sus scrofa (pigs), and various species across the animal kingdom, including vertebrates and invertebrates like Acanthamoeba castellanii. Its biotic relationship is classified as free-living, indicating its adaptability to various environments and hosts. Importantly, E. coli C5 is linked to numerous health effects, particularly in humans, where it has been associated with urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and foodborne illnesses, among others. The strain's pathogenicity highlights its role in significant health challenges, including hemolytic uremic syndrome (HUS) and various forms of diarrhea, which can lead to severe complications such as renal failure and sepsis. This strain’s ability to infect a wide range of hosts and its association with serious health conditions underscores its ecological role in both environmental and clinical settings. The presence of E. coli C5 in diverse habitats and its potential for pathogenicity exemplify the complexities of microbial interactions within ecosystems and the importance of monitoring its impact on health and disease.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain C5

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain C5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain C5


Gene Summary

Adenine Count

56266 bp

Thymine Count

55759 bp

Guanine Count

47863 bp

Cytosine Count

54557 bp

Genome Length

214445 bp

Protein-coding Genes

239 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf6862 domain-containing proteinRG28_RS32940Not AvailableNegative97 - 100830537.2
duf6862 domain-containing proteinRG28_RS31540Not AvailableNegative1752 - 211212853.0
duf6862 domain-containing proteinRG28_RS28240Not AvailableNegative2347 - 25838772.47
is3 family transposaseRG28_RS28245Not AvailableNegative2758 - 397146346.2
tn3 family transposaseRG28_RS32585Not AvailableNegative4023 - 455619732.2
duf4158 domain-containing proteinRG28_RS32590Not AvailableNegative5161 - 630945105.6
recombinase family proteinRG28_RS28280Not AvailablePositive6466 - 704721507.2
duf6862 domain-containing proteinRG28_RS28285Not AvailablePositive7092 - 768522591.1
duf6862 domain-containing proteinRG28_RS28290Not AvailablePositive7763 - 927253512.7
duf6862 domain-containing proteinRG28_RS28295Not AvailablePositive9356 - 982017186.1

Displaying genes 1 – 10 of 353 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 74 in total