Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain C5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
56266 bp
Thymine Count
55759 bp
Guanine Count
47863 bp
Cytosine Count
54557 bp
Genome Length
214445 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6862 domain-containing protein | RG28_RS28615 | Not Available | Negative | 58351 - 59758 | 49123.9 |
| type-f conjugative transfer system secretin trak | RG28_RS28620 | Not Available | Negative | 59758 - 60486 | 25628.6 |
| type iv conjugative transfer system protein trae | RG28_RS28625 | Not Available | Negative | 60473 - 61039 | 21225.5 |
| type iv conjugative transfer system protein tral | RG28_RS28630 | Not Available | Negative | 61061 - 61372 | 11869.6 |
| type iv conjugative transfer system pilin traa | RG28_RS28635 | Not Available | Negative | 61387 - 61746 | 12695.2 |
| conjugal transfer relaxosome protein tray | RG28_RS28640 | Not Available | Negative | 61780 - 62007 | 9005.61 |
| pas domain-containing protein | RG28_RS28645 | Not Available | Negative | 62101 - 62787 | 26303.4 |
| conjugal transfer relaxosome dna-binding protein tram | RG28_RS28650 | Not Available | Negative | 62974 - 63357 | 14599.5 |
| duf6862 domain-containing protein | RG28_RS28655 | Not Available | Positive | 63712 - 64281 | 21415.9 |
| duf932 domain-containing protein | RG28_RS28660 | Not Available | Negative | 64578 - 65399 | 31712.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





