Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain C5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
56266 bp
Thymine Count
55759 bp
Guanine Count
47863 bp
Cytosine Count
54557 bp
Genome Length
214445 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer complement resistance protein trat | RG28_RS28470 | Not Available | Negative | 37402 - 38133 | 25848.1 |
| conjugal transfer entry exclusion protein tras | RG28_RS28475 | Not Available | Negative | 38147 - 38656 | 19435.7 |
| conjugal transfer mating-pair stabilization protein trag | RG28_RS28480 | Not Available | Negative | 38653 - 41499 | 103768.0 |
| conjugal transfer pilus assembly protein trah | RG28_RS28485 | Not Available | Negative | 41496 - 42869 | 50545.6 |
| f-type conjugal transfer protein trbf | RG28_RS32600 | Not Available | Negative | 42856 - 43248 | 15455.0 |
| duf6862 domain-containing protein | RG28_RS32605 | Not Available | Negative | 43202 - 43517 | 11448.2 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | RG28_RS28495 | Not Available | Negative | 43507 - 44052 | 19899.3 |
| type-f conjugative transfer system pilin chaperone traq | RG28_RS28500 | Not Available | Negative | 44039 - 44323 | 10836.4 |
| protein arta | RG28_RS28505 | Not Available | Positive | 44404 - 44718 | 12131.2 |
| conjugal transfer protein trba | RG28_RS28510 | Not Available | Negative | 44720 - 45067 | 13048.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





