Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain C5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
56266 bp
Thymine Count
55759 bp
Guanine Count
47863 bp
Cytosine Count
54557 bp
Genome Length
214445 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele family toxin | RG28_RS30115 | Not Available | Negative | 72984 - 73271 | 11074.7 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | RG28_RS30120 | Not Available | Negative | 73268 - 73519 | 9212.98 |
| hypothetical protein | RG28_RS32650 | Not Available | Positive | 73967 - 74104 | 4861.04 |
| hypothetical protein | RG28_RS30135 | Not Available | Positive | 74124 - 74387 | 9963.68 |
| type ii toxin-antitoxin system rele/pare family toxin | RG28_RS30140 | Not Available | Positive | 74377 - 74676 | 11464.5 |
| hypothetical protein | RG28_RS31690 | Not Available | Positive | 75208 - 75288 | 3148.68 |
| ion channel | RG28_RS30155 | Not Available | Negative | 75490 - 76113 | 23437.2 |
| hypothetical protein | RG28_RS30165 | Not Available | Positive | 76983 - 77990 | 37404.4 |
| plasmid partitioning/stability family protein | RG28_RS30170 | Not Available | Negative | 78060 - 78455 | 14920.8 |
| plasmid segregation protein parm | RG28_RS30175 | Not Available | Negative | 78455 - 79414 | 35566.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





